Undibacterium danionis sp. Nov. isolated from a zebrafish (Danio rerio)

Peter Kämpfer, Rute Irgang, Hans Jürgen Busse, Matías Poblete-Morales, Tanita Kleinhagauer, Stefanie P. Glaeser, Ruben Avendaño-Herrera

Resultado de la investigación: Contribución a una revistaArtículo

5 Citas (Scopus)

Resumen

One beige-pigmented, Gram-stain-negative, rod-shaped bacterium, strain E3/4T, was isolated from a zebrafish, Danio rerio. Phylogenetic analysis based on nearly full-length 16S rRNA gene sequences showed that the isolate shared 98.5% 16S rRNA gene sequence identity to the type strain of Undibacterium macrobrachii and 97.8% to the type strain of Undibacterium seohonense. Lower 16S rRNA gene sequence similarities (<97.0 %) could be found in comparison with all other species of the genus Undibacterium. DNA–DNA hybridization with Undibacterium macrobrachii LMG 26891T showed a low level of relatedness, <35 %. The main cellular fatty acids of the strain were summed feature 3 fatty acids (C16: 1ω7c/C16: 1ω8c), C10: 0 3-OH and C16: 0. The polyamine pattern of strain E3/4T contained predominantly putrescine and 2-hydroxyputrescine. The major quinone was ubiquinone Q-8. Major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. On the basis of phylogenetic, chemotaxonomic, genomic and phenotypic analyses we propose a novel species of the genus Undibacterium, Undibacterium danionis, with strain E3/4T (=DSM 102221T=CCM 8677T=CIP 111017T) as the type strain.

Idioma originalInglés
Número de artículo001244
Páginas (desde-hasta)3625-3631
Número de páginas7
PublicaciónInternational Journal of Systematic and Evolutionary Microbiology
Volumen66
N.º9
DOI
EstadoPublicada - 1 sep 2016

Áreas temáticas de ASJC Scopus

  • Microbiología
  • Ecología, evolución, comportamiento y sistemática

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  • Citar esto

    Kämpfer, P., Irgang, R., Busse, H. J., Poblete-Morales, M., Kleinhagauer, T., Glaeser, S. P., & Avendaño-Herrera, R. (2016). Undibacterium danionis sp. Nov. isolated from a zebrafish (Danio rerio). International Journal of Systematic and Evolutionary Microbiology, 66(9), 3625-3631. [001244]. https://doi.org/10.1099/ijsem.0.001244