Differential expression of genes from Penicillium purpurogenum when grown on sugar beet pulp and glucose as carbon sources

Carolina Klagges, Wladimir Mardones, Jaime Eyzaguirre

Resultado de la investigación: Article

  • 1 Citas

Resumen

Penicillium purpurogenum is a filamentous ascomycete which grows on a variety of natural carbon sources, among them sugar beet pulp, and secretes a large variety of cellulolytic and hemicellulolytic enzymes into the culture medium. The purpose of this work was to analyse the difference in the expression of genes when those transcribed in a medium with glucose as carbon source (a highly repressive substrate) are subtracted from those expressed when it is grown on sugar beet pulp. A subtractive cDNA library was constructed by means of suppression subtractive hybridization. In all, 101 clones were selected and 80 were found to have inserts of cDNA differentially expressed in sugar beet pulp. These cDNAs were sequenced and were queried for similarities with BLAST. Sixty-two unique expressed sequence tags (ESTs) of interest were obtained. Of them, 58% are unidentified and 5% are unclassified. The remaining sequences correspond to: 18% metabolism, 5% gene/protein expression, 5% cell/organism defence, 6% cell signalling/cell communication and 3% cell division. The complete sequences of the genes and cDNAs of two of the ESTs was performed; one of them (EST 19) codes for a putative transcriptional regulator and the other (EST 182) for a putative DNA repair protein.

IdiomaEnglish
Páginas109-118
Número de páginas10
PublicaciónMycology
Volumen3
Número de edición2
DOI
EstadoPublished - 1 jun 2012

Huella dactilar

Talaromyces purpurogenus
sugar beet pulp
Beta vulgaris
Penicillium
Expressed Sequence Tags
expressed sequence tags
Carbon
Gene Expression
Glucose
gene expression
glucose
Complementary DNA
carbon
cell communication
Ascomycota
suppression subtractive hybridization
DNA repair
Gene Library
Cell Communication
cDNA libraries

Keywords

    ASJC Scopus subject areas

    • Infectious Diseases
    • Microbiology
    • Plant Science

    Citar esto

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    abstract = "Penicillium purpurogenum is a filamentous ascomycete which grows on a variety of natural carbon sources, among them sugar beet pulp, and secretes a large variety of cellulolytic and hemicellulolytic enzymes into the culture medium. The purpose of this work was to analyse the difference in the expression of genes when those transcribed in a medium with glucose as carbon source (a highly repressive substrate) are subtracted from those expressed when it is grown on sugar beet pulp. A subtractive cDNA library was constructed by means of suppression subtractive hybridization. In all, 101 clones were selected and 80 were found to have inserts of cDNA differentially expressed in sugar beet pulp. These cDNAs were sequenced and were queried for similarities with BLAST. Sixty-two unique expressed sequence tags (ESTs) of interest were obtained. Of them, 58{\%} are unidentified and 5{\%} are unclassified. The remaining sequences correspond to: 18{\%} metabolism, 5{\%} gene/protein expression, 5{\%} cell/organism defence, 6{\%} cell signalling/cell communication and 3{\%} cell division. The complete sequences of the genes and cDNAs of two of the ESTs was performed; one of them (EST 19) codes for a putative transcriptional regulator and the other (EST 182) for a putative DNA repair protein.",
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    Differential expression of genes from Penicillium purpurogenum when grown on sugar beet pulp and glucose as carbon sources. / Klagges, Carolina; Mardones, Wladimir; Eyzaguirre, Jaime.

    En: Mycology, Vol. 3, N.º 2, 01.06.2012, p. 109-118.

    Resultado de la investigación: Article

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    AU - Mardones, Wladimir

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